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-rw-r--r--paper/predict-testset.rb19
1 files changed, 0 insertions, 19 deletions
diff --git a/paper/predict-testset.rb b/paper/predict-testset.rb
deleted file mode 100644
index 7da6f31..0000000
--- a/paper/predict-testset.rb
+++ /dev/null
@@ -1,19 +0,0 @@
-require_relative '../../lazar/lib/lazar'
-include OpenTox
-
-dir = File.join(File.dirname(__FILE__),"..","regression")
-test = Dataset.from_csv_file(File.join(dir,"common-test.csv"))
-[
- "LOAEL_mg_corrected_smiles_mmol.csv",
- "swissRat_chron_LOAEL_mmol.csv",
- "LOAEL-rat-combined.csv"
-].each do |train|
- file = File.join(dir,train)
- params = {
- :prediction_algorithm => "OpenTox::Algorithm::Regression.local_pls_regression",
- }
- dataset = Dataset.from_csv_file file
- model = Model::LazarRegression.create dataset, params
- validation = Validation.create model, dataset, test
- puts "#{train}: #{validation.id.to_s}"
-end