diff options
Diffstat (limited to 'scripts/crossvalidation-plots.R')
| -rwxr-xr-x | scripts/crossvalidation-plots.R | 16 |
1 files changed, 9 insertions, 7 deletions
diff --git a/scripts/crossvalidation-plots.R b/scripts/crossvalidation-plots.R index 2bc259f..7a4f340 100755 --- a/scripts/crossvalidation-plots.R +++ b/scripts/crossvalidation-plots.R @@ -1,15 +1,17 @@ +#!/usr/bin/Rscript + library(ggplot2) library(grid) library(gridExtra) -t0 = read.csv("data/training-cv-0.csv",header=T) -t1 = read.csv("data/training-cv-1.csv",header=T) -t2 = read.csv("data/training-cv-2.csv",header=T) +t0 = read.csv("data/training_log10-cv-0.csv",header=T) +t1 = read.csv("data/training_log10-cv-1.csv",header=T) +t2 = read.csv("data/training_log10-cv-2.csv",header=T) -p0 = qplot(-log10(LOAEL_predicted),-log10(LOAEL_measured_median),data=t0,xlab="-log10(LOAEL predicted)",ylab="-log10(LOAEL measured median)",main="Combined") + geom_point() + geom_abline(intercept=0.0) + xlim(-2,4.5) + ylim(-2,4.5) -p1 = qplot(-log10(LOAEL_predicted),-log10(LOAEL_measured_median),data=t1,xlab="-log10(LOAEL predicted)",ylab="-log10(LOAEL measured median)",main="Combined") + geom_point() + geom_abline(intercept=0.0) + xlim(-2,4.5) + ylim(-2,4.5) -p2 = qplot(-log10(LOAEL_predicted),-log10(LOAEL_measured_median),data=t2,xlab="-log10(LOAEL predicted)",ylab="-log10(LOAEL measured median)",main="Combined") + geom_point() + geom_abline(intercept=0.0) + xlim(-2,4.5) + ylim(-2,4.5) +p0 = qplot(LOAEL_predicted,LOAEL_measured_median,data=t0,xlab="-log10(LOAEL predicted)",ylab="-log10(LOAEL measured median)",main="Combined") + geom_point() + geom_abline(intercept=0.0) + xlim(-2,4.5) + ylim(-2,4.5) +p1 = qplot(LOAEL_predicted,LOAEL_measured_median,data=t1,xlab="-log10(LOAEL predicted)",ylab="-log10(LOAEL measured median)",main="Combined") + geom_point() + geom_abline(intercept=0.0) + xlim(-2,4.5) + ylim(-2,4.5) +p2 = qplot(LOAEL_predicted,LOAEL_measured_median,data=t2,xlab="-log10(LOAEL predicted)",ylab="-log10(LOAEL measured median)",main="Combined") + geom_point() + geom_abline(intercept=0.0) + xlim(-2,4.5) + ylim(-2,4.5) -pdf('figure/crossvalidation.pdf') +pdf('figures/crossvalidation.pdf') grid.arrange(p0,p1,p2,ncol=2) dev.off() |