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authorChristoph Helma <helma@in-silico.ch>2020-10-17 21:38:38 +0200
committerChristoph Helma <helma@in-silico.ch>2020-10-17 21:38:38 +0200
commit65241cb78078051120f33d42b745addebc145847 (patch)
treeeed15544dc74e94c811ad50efcdc333e2633ce90
parent4b6c7b29b9e59ad9d80f0428b9859b91c6b1d9f1 (diff)
typos fixed
-rw-r--r--mutagenicity.md4
-rw-r--r--mutagenicity.pdfbin1833299 -> 1833317 bytes
2 files changed, 2 insertions, 2 deletions
diff --git a/mutagenicity.md b/mutagenicity.md
index 9efecfd..3cba82b 100644
--- a/mutagenicity.md
+++ b/mutagenicity.md
@@ -42,7 +42,7 @@ Abstract
Random forest, support vector machine, logistic regression, neural networks and k-nearest neighbor
(`lazar`) algorithms, were applied to new *Salmonella* mutagenicity dataset
with 8309 unique chemical structures. The best prediction accuracies in
-10-fold-crossvalidation were obtained with `lazar` models and Mol, that gave accuracies
+10-fold-crossvalidation were obtained with `lazar` models and MolPrint2D descriptors, that gave accuracies ({{lazar-high-confidence.acc_perc}}%)
similar to the interlaboratory variability of the Ames test.
**TODO**: PA results
@@ -753,7 +753,7 @@ A new public *Salmonella* mutagenicity training dataset with 8309 compounds was
created and used it to train `lazar`, R and Tensorflow models with MolPrint2D
and PaDEL descriptors. The best performance was obtained with `lazar` models
using MolPrint2D descriptors, with prediction accuracies
-({{lazar-high-confidence.acc}}) comparable to the interlaboratory variability
+({{lazar-high-confidence.acc_perc}}%) comparable to the interlaboratory variability
of the Ames test (80-85%). Models based on PaDEL descriptors had lower
accuracies than MolPrint2D models, but only the `lazar` algorithm could use
MolPrint2D descriptors.
diff --git a/mutagenicity.pdf b/mutagenicity.pdf
index 7c04ef7..e33d90c 100644
--- a/mutagenicity.pdf
+++ b/mutagenicity.pdf
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