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author | Christoph Helma <helma@in-silico.ch> | 2021-06-30 12:50:00 +0200 |
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committer | Christoph Helma <helma@in-silico.ch> | 2022-08-18 12:51:45 +0200 |
commit | 66543ccf5724f55e39775a1650b7b36381ae5ea9 (patch) | |
tree | f4b40e1774cdc368143b00e60939c12642bdc6f2 /scripts/data.rb | |
parent | 1f956a4963f62c90475ac8e1f713b989b5a99b36 (diff) |
Diffstat (limited to 'scripts/data.rb')
-rwxr-xr-x | scripts/data.rb | 9 |
1 files changed, 9 insertions, 0 deletions
diff --git a/scripts/data.rb b/scripts/data.rb index 72e6b28..d24e46b 100755 --- a/scripts/data.rb +++ b/scripts/data.rb @@ -6,6 +6,15 @@ data = {} data.merge!(YAML.load_file(File.join(dir,"summary.yaml"))) end +mut = {} +File.readlines("mutagenicity/mutagenicity.csv").each do |line| + smi, m = line.chomp.split(",") + mut[smi] ||= [] + mut[smi] << m +end + +data[:cv][:n_mult] = mut.select{|s,m| m.size > 1}.size + data[:cv][:n] = `cut -f1 -d ',' mutagenicity/mutagenicity.csv | wc -l`.chomp.to_i - 1 data[:cv][:n_uniq] = `cut -f1 -d ',' mutagenicity/mutagenicity.csv | sort -u | wc -l`.chomp.to_i - 1 |