diff options
Diffstat (limited to 'scripts')
| -rwxr-xr-x | scripts/drop-database.rb | 5 | ||||
| -rwxr-xr-x | scripts/export-fingerprints.rb | 7 | ||||
| -rwxr-xr-x | scripts/export.rb | 7 | ||||
| -rwxr-xr-x | scripts/lazar-crossvalidation.rb | 8 | ||||
| -rwxr-xr-x | scripts/lazar-model.rb | 6 | ||||
| -rwxr-xr-x | scripts/repeated_crossvalidation_summary.rb | 15 |
6 files changed, 0 insertions, 48 deletions
diff --git a/scripts/drop-database.rb b/scripts/drop-database.rb deleted file mode 100755 index e263312..0000000 --- a/scripts/drop-database.rb +++ /dev/null @@ -1,5 +0,0 @@ -#!/usr/bin/env ruby -require_relative '../../lazar/lib/lazar' -$mongo.database.drop -$gridfs = $mongo.database.fs # recreate GridFS indexes - diff --git a/scripts/export-fingerprints.rb b/scripts/export-fingerprints.rb deleted file mode 100755 index 6b9c3db..0000000 --- a/scripts/export-fingerprints.rb +++ /dev/null @@ -1,7 +0,0 @@ -#!/usr/bin/env ruby -require_relative '../../lazar/lib/lazar' -include OpenTox - -cv = Validation::CrossValidation.find File.read(ARGV[0]).chomp -dataset = cv.model.training_dataset -puts dataset.to_fingerprint_csv diff --git a/scripts/export.rb b/scripts/export.rb deleted file mode 100755 index 76d201b..0000000 --- a/scripts/export.rb +++ /dev/null @@ -1,7 +0,0 @@ -#!/usr/bin/env ruby -require_relative '../../lazar/lib/lazar' -include OpenTox - -cv = Validation::CrossValidation.find File.read(ARGV[0]).chomp -dataset = cv.model.training_dataset -puts dataset.send("to_#{ARGV[1]}") diff --git a/scripts/lazar-crossvalidation.rb b/scripts/lazar-crossvalidation.rb deleted file mode 100755 index a6792b7..0000000 --- a/scripts/lazar-crossvalidation.rb +++ /dev/null @@ -1,8 +0,0 @@ -#!/usr/bin/env ruby -require_relative '../../lazar/lib/lazar' -include OpenTox - -training_dataset = Dataset.from_csv_file ARGV[0] -model = Model::Lazar.create training_dataset: training_dataset -cv = Validation::CrossValidation.create model -puts cv.id.to_s diff --git a/scripts/lazar-model.rb b/scripts/lazar-model.rb deleted file mode 100755 index 879b539..0000000 --- a/scripts/lazar-model.rb +++ /dev/null @@ -1,6 +0,0 @@ -#!/usr/bin/env ruby -require_relative '../../lazar/lib/lazar' -include OpenTox - -model = Model::Lazar.from_csv_file ARGV[0] -puts model.id.to_s diff --git a/scripts/repeated_crossvalidation_summary.rb b/scripts/repeated_crossvalidation_summary.rb deleted file mode 100755 index 067fea8..0000000 --- a/scripts/repeated_crossvalidation_summary.rb +++ /dev/null @@ -1,15 +0,0 @@ -#!/usr/bin/env ruby -require_relative '../../lazar/lib/lazar' -include OpenTox - -summary = [] -#Validation::RepeatedCrossValidation.find(File.read(ARGV[0]).chomp).crossvalidations.each do |cv| -# summary << cv.statistics -#end -cv = Validation::RepeatedCrossValidation.all.last.crossvalidations.each do |cv| -#cv = Validation::RepeatedCrossValidation.find("5bbb9151ca626916248b328b").crossvalidations.first -p cv.id -p cv.statistics -end - -#puts JSON.pretty_generate(summary) |