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path: root/scripts/pa-groups.R
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#!/usr/bin/env Rscript
library(ggplot2)
data <- read.csv("tables/pa-table.csv")
for (i in c(2:10)) {
  name <- names(data)[i]
  cols <- append(c(15,17),c(19:28))
  group <- data[data[i] == 1,cols]
  freq <- 100*colSums(group,na.rm=TRUE)/colSums(!is.na(group))
  plot <- ggplot(data.frame(freq),aes(x=names(data)[cols],y=freq)) + geom_bar(stat="identity") + ylab("% mutagenic") + xlab(name) + ylim(c(0,100))
  ggsave(paste("figures/",name,".png",sep=""))
}