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%div
%a.btn.btn-xs.btn-default{:href => to('/predict'), :style=>"margin-bottom:1em;"}
%span.glyphicon.glyphicon-chevron-left
New Prediction
%h3.help-block
Similar particles
%hr
:javascript
$(document).ready(function(){
$(".tablesorter").tablesorter({
debug: false,
theme: "bootstrap",
headerTemplate: '{content} {icon}',
widgets: ['uitheme', 'staticRow', 'stickyHeaders'],
widgetOptions: {
stickyHeaders_xScroll : null
},
sortList: [[1,1]],
widthFixed: false,
});
$('#neighbors').doubleScroll();
});
#neighbors.table-responsive
/%table.tablesorter{:style => "max-width:100%;white-space:nowrap;"}
%table.tablesorter
%thead
%tr
%th
ID
%th
Similarity
%th
Composition
%th.tox{:style => "max-width:100%;white-space:nowrap;"}
Toxicity
%br
Net cell association
%br
[mL/ug(Mg)]
- @input.sort_by{|d| OpenTox::Feature.find(d[0]).category}.each do |key|
- feature = OpenTox::Feature.find_by(:id=>key[0])
- name = feature.name
- if (feature[:conditions] && !feature[:conditions]["MEDIUM"].blank?)
- name = feature.name + " / " + feature[:conditions]["MEDIUM"]
- else
- name = feature.name
%th.physchem
= name
%tbody
/ query and match combined
%tr.static
/ id
%td
- if @match
%a{:href=> $ambit_search+@name, :rel=>"external"}
%h5.th5= @name
- else
%h5.th5 Query
/ similarity
%td
- if @match
%h5.th5 1
- else
%h5.th5 x
/ composition
%td
- if @match
%h5.th5 Core:
%a{:href=>@nanoparticle[:core]["uri"], :rel=>"external"}= "["+@nanoparticle[:core]["name"]+"]"
/%br
/%h5.th5 Coating:
/= @nanoparticle[:coating][0]["name"]
/%br
- else
%h5.th5 Core:
= "["+@nanoparticle[:core]["name"]+"]"
/%br
/%h5.th5 Coating:
/= @nanoparticle[:coating][0]["name"]
/%br
/ tox
%td.tox
- if @prediction[:value]
%h5.th5 Prediction:
= @prediction[:value].round(3)
%br
- if @prediction[:rmse]
%h5.th5
%a{:href=>"https://en.wikipedia.org/wiki/Root-mean-square_deviation", :rel=>"external"} RMSE:
= @prediction[:rmse].round(3)
%br
- if @prediction[:r_squared]
%h5.th5
%a{:href=>"https://en.wikipedia.org/wiki/Coefficient_of_determination", :rel=>"external"}= "R"+"<sup>2</sup>"+":"
= @prediction[:r_squared].round(3)
%br
- if @prediction[:prediction_interval]
%h5
%a{:href=>"https://en.wikipedia.org/wiki/Prediction_interval", :rel=>"external"} 95% Prediction interval:
- interval = @prediction[:prediction_interval].nil? ? " - - " : @prediction[:prediction_interval].collect{|i| i.round(2)}
= "#{interval[0]} - #{interval[1]}"
- if @prediction[:measurements]
%br
%h5.th5 Measurement:
- @prediction[:measurements].each do |m|
= m
- if !@prediction[:value] && !@prediction[:measurements]
%h5.th5 not available
/ physchem
- @input.sort_by{|d| OpenTox::Feature.find(d[0]).category}.each do |v|
%td.physchem
%div{:style=>"display:inline-block;padding-right:20px;"}
- if v[1].nil?
%p x
- else
%p= v[1][0].round(3)
/ neighbors
- if @prediction[:neighbors]
- @prediction[:neighbors].each_with_index do |neighbor,idx|
- nano = OpenTox::Nanoparticle.find(neighbor["_id"])
- pc_descriptors = nano.physchem_descriptors.delete_if{|id,v| OpenTox::Feature.find(id).category != "P-CHEM"} if @type == "pc"
%tr
/ ID
%td
%a{:href=> $ambit_search+nano.name, :rel=>"external"}
%h5.th5= nano.name
/ Similarity
%td
%h5.th5= neighbor["similarity"].round(3)
/ Composition
%td
%h5.th5 Core:
%a{:href=>nano[:core]["uri"], :rel=> "external"}= "["+nano[:core]["name"]+"]"
%br
%h5.th5 Coating:
%a{:href=>nano[:coating][0]["uri"], :rel=>"external"}= nano[:coating][0]["name"]
/ Tox
%td.tox
%h5.th5 Measurement:
= neighbor["measurements"][0]
/ Physchem
- nano.physchem_descriptors.delete_if{|id,v| @type == "pc" ? !@@pc_relevant_features.include?(OpenTox::Feature.find(id)) : !@@pcp_relevant_features.include?(OpenTox::Feature.find(id))}.sort_by{|id,v| OpenTox::Feature.find(id).category}.each do |k,v|
%td.physchem
%div
%div{:style=>"display:inline-block;padding-right:20px;"}
= v[0].round(3) unless v.nil?
|
