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author | Christoph Helma <helma@in-silico.ch> | 2010-05-21 15:55:17 +0200 |
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committer | Christoph Helma <helma@in-silico.ch> | 2010-05-21 15:55:17 +0200 |
commit | d5eea102ff343804dde1ccd254bc570596341a89 (patch) | |
tree | f62d8c2999341d99746ae644c795d1e9b2d3c7f7 /lib/compound.rb | |
parent | 147a45ce7336959777639d15a4c37fbe24375d97 (diff) |
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Diffstat (limited to 'lib/compound.rb')
-rw-r--r-- | lib/compound.rb | 4 |
1 files changed, 3 insertions, 1 deletions
diff --git a/lib/compound.rb b/lib/compound.rb index cc29fc5..6ab78e0 100644 --- a/lib/compound.rb +++ b/lib/compound.rb @@ -18,7 +18,9 @@ module OpenTox @uri = File.join(@@config[:services]["opentox-compound"],URI.escape(@inchi)) elsif params[:name] # paranoid URI encoding to keep SMILES charges and brackets - @inchi = RestClientWrapper.get("#{@@cactus_uri}#{URI.encode(params[:name], Regexp.new("[^#{URI::PATTERN::UNRESERVED}]"))}/stdinchi").chomp + @inchi = RestClient.get("#{@@cactus_uri}#{URI.encode(params[:name], Regexp.new("[^#{URI::PATTERN::UNRESERVED}]"))}/stdinchi").body.chomp + # this was too hard for me to debug and leads to additional errors (ch) + #@inchi = RestClientWrapper.get("#{@@cactus_uri}#{URI.encode(params[:name], Regexp.new("[^#{URI::PATTERN::UNRESERVED}]"))}/stdinchi").chomp @uri = File.join(@@config[:services]["opentox-compound"],URI.escape(@inchi)) elsif params[:uri] @uri = params[:uri] |