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-rw-r--r--lib/opentox.rb36
1 files changed, 23 insertions, 13 deletions
diff --git a/lib/opentox.rb b/lib/opentox.rb
index 4338302..4b43547 100644
--- a/lib/opentox.rb
+++ b/lib/opentox.rb
@@ -4,7 +4,7 @@ $logger.level = Logger::DEBUG
module OpenTox
- attr_accessor :uri, :subjectid, :rdf, :response
+ attr_accessor :uri, :subjectid, :rdf, :response, :reload
# Ruby interface
@@ -15,38 +15,34 @@ module OpenTox
def initialize uri=nil, subjectid=nil
@uri = uri.to_s.chomp
@subjectid = subjectid
+ @reload = true
@rdf = RDF::Graph.new
end
# Load metadata from service
def pull
- kind_of?(OpenTox::Dataset) ? uri = File.join(@uri,"metadata") : uri = @uri
# TODO generic method for all formats
- parse_rdfxml RestClientWrapper.get(uri,{},{:accept => $default_rdf, :subjectid => @subjectid})
+ parse_rdfxml RestClientWrapper.get(@uri,{},{:accept => $default_rdf, :subjectid => @subjectid})
end
# Get object metadata
# @return [Hash] Metadata
- # TODO: rename to_hash? or store in object variables
def metadata
- pull # force update
- metadata = {}
- @rdf.query([RDF::URI.new(@uri),nil,nil]).collect do |statement|
- metadata[statement.predicate] ||= []
- metadata[statement.predicate] << statement.object
- end
- metadata.each{|k,v| metadata[k] = v.first if v.size == 1}
+ pull if @reload # force update
+ @rdf.to_hash[RDF::URI.new(@uri)]
end
# Get metadata values
# @param [RDF] Key from RDF Vocabularies
# @return [Array] Values for supplied key
def [](key)
- pull # force update
+ pull if @reload # force update
result = @rdf.query([RDF::URI.new(@uri),key,nil]).collect{|statement| statement.object}
- return nil if result.empty?
+ # TODO: convert to OpenTox objects??
+ return nil if result and result.empty?
return result.first.to_s if result.size == 1
return result.collect{|r| r.to_s}
+ result
end
# Save object at service
@@ -74,6 +70,20 @@ module OpenTox
end
end
+# def to_hash
+# hash = {}
+# metadata.each{|k,v| v.is_a?(Array) ? hash[k.to_s] = v.collect{|i| i.to_s} : hash[k.to_s] = v.to_s}
+# hash
+# end
+
+ def to_yaml
+ @rdf.to_hash.to_yaml
+ end
+
+ def to_json
+ to_hash.to_json
+ end
+
# REST API
def get headers={}
headers[:subjectid] ||= @subjectid