Regenerate gemspec for version 4.0.0

1 files changed, 109 insertions, 102 deletions

diff --git a/opentox-ruby.gemspec b/opentox-ruby.gemspec
index d3ae2d7..6afedb3 100644
--- a/opentox-ruby.gemspec
+++ b/opentox-ruby.gemspec
@@ -4,26 +4,25 @@
 # -*- encoding: utf-8 -*-
 
 Gem::Specification.new do |s|
-  s.name = %q{opentox-ruby}
-  s.version = "2.0.1"
+  s.name = "opentox-ruby"
+  s.version = "4.0.0"
 
   s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
   s.authors = ["Christoph Helma, Martin Guetlein, Andreas Maunz, Micha Rautenberg, David Vorgrimmler"]
-  s.date = %q{2011-06-15}
-  s.description = %q{Ruby wrapper for the OpenTox REST API (http://www.opentox.org)}
-  s.email = %q{helma@in-silico.ch}
-  s.executables = ["opentox-install-debian.sh", "opentox-install-ubuntu.sh"]
+  s.date = "2012-07-16"
+  s.description = "Ruby wrapper for the OpenTox REST API (http://www.opentox.org)"
+  s.email = "helma@in-silico.ch"
   s.extra_rdoc_files = [
+    "ChangeLog",
     "LICENSE",
     "README.markdown"
   ]
   s.files = [
+    "ChangeLog",
     "LICENSE",
     "README.markdown",
     "Rakefile",
     "VERSION",
-    "bin/opentox-install-debian.sh",
-    "bin/opentox-install-ubuntu.sh",
     "lib/algorithm.rb",
     "lib/authorization.rb",
     "lib/compound.rb",
@@ -41,121 +40,129 @@ Gem::Specification.new do |s|
     "lib/overwrite.rb",
     "lib/parser.rb",
     "lib/policy.rb",
+    "lib/r-util.rb",
     "lib/rest_client_wrapper.rb",
     "lib/serializer.rb",
     "lib/spork.rb",
+    "lib/stratification.R",
     "lib/task.rb",
     "lib/templates/default_guest_policy.xml",
     "lib/templates/default_policy.xml",
     "lib/to-html.rb",
     "lib/transform.rb",
-    "lib/utils.rb"
+    "lib/utils.rb",
     "lib/validation.rb"
   ]
-  s.homepage = %q{http://github.com/helma/opentox-ruby}
+  s.homepage = "http://github.com/opentox/opentox-ruby"
   s.require_paths = ["lib"]
-  s.rubygems_version = %q{1.5.2}
-  s.summary = %q{Ruby wrapper for the OpenTox REST API}
+  s.rubygems_version = "1.8.18"
+  s.summary = "Ruby wrapper for the OpenTox REST API"
 
   if s.respond_to? :specification_version then
     s.specification_version = 3
 
     if Gem::Version.new(Gem::VERSION) >= Gem::Version.new('1.2.0') then
-      s.add_runtime_dependency(%q<sinatra>, [">= 0"])
-      s.add_runtime_dependency(%q<emk-sinatra-url-for>, [">= 0"])
-      s.add_runtime_dependency(%q<sinatra-respond_to>, [">= 0"])
-      s.add_runtime_dependency(%q<sinatra-static-assets>, [">= 0"])
-      s.add_runtime_dependency(%q<rest-client>, [">= 0"])
-      s.add_runtime_dependency(%q<rack>, [">= 0"])
-      s.add_runtime_dependency(%q<rack-contrib>, [">= 0"])
-      s.add_runtime_dependency(%q<rack-flash>, [">= 0"])
-      s.add_runtime_dependency(%q<nokogiri>, [">= 0"])
-      s.add_runtime_dependency(%q<rubyzip>, [">= 0"])
-      s.add_runtime_dependency(%q<roo>, [">= 0"])
-      s.add_runtime_dependency(%q<spreadsheet>, [">= 0"])
-      s.add_runtime_dependency(%q<google-spreadsheet-ruby>, [">= 0"])
-      s.add_runtime_dependency(%q<yajl-ruby>, [">= 0"])
-      s.add_runtime_dependency(%q<tmail>, [">= 0"])
-      s.add_runtime_dependency(%q<rinruby>, [">= 0"])
-      s.add_runtime_dependency(%q<ohm>, [">= 0"])
-      s.add_runtime_dependency(%q<ohm-contrib>, [">= 0"])
-      s.add_runtime_dependency(%q<SystemTimer>, [">= 0"])
-      s.add_runtime_dependency(%q<rjb>, [">= 0"])
-      s.add_runtime_dependency(%q<dm-core>, [">= 0"])
-      s.add_runtime_dependency(%q<dm-serializer>, [">= 0"])
-      s.add_runtime_dependency(%q<dm-timestamps>, [">= 0"])
-      s.add_runtime_dependency(%q<dm-types>, [">= 0"])
-      s.add_runtime_dependency(%q<dm-migrations>, [">= 0"])
-      s.add_runtime_dependency(%q<dm-validations>, [">= 0"])
-      s.add_runtime_dependency(%q<dm-sqlite-adapter>, [">= 0"])
-      s.add_runtime_dependency(%q<haml>, [">= 3"])
-      s.add_runtime_dependency(%q<ruby-plot>, ["~> 0.4.0"])
-      s.add_runtime_dependency(%q<statsample>, [">= 0"])
+      s.add_runtime_dependency(%q<sinatra>, ["= 1.2.6"])
+      s.add_runtime_dependency(%q<emk-sinatra-url-for>, ["= 0.2.1"])
+      s.add_runtime_dependency(%q<sinatra-respond_to>, ["= 0.7.0"])
+      s.add_runtime_dependency(%q<sinatra-static-assets>, ["= 0.5.0"])
+      s.add_runtime_dependency(%q<rest-client>, ["= 1.6.1"])
+      s.add_runtime_dependency(%q<rack>, ["= 1.3.5"])
+      s.add_runtime_dependency(%q<rack-contrib>, ["= 1.1.0"])
+      s.add_runtime_dependency(%q<rack-flash>, ["= 0.1.1"])
+      s.add_runtime_dependency(%q<nokogiri>, ["= 1.4.4"])
+      s.add_runtime_dependency(%q<rubyzip>, ["= 0.9.4"])
+      s.add_runtime_dependency(%q<roo>, ["= 1.9.3"])
+      s.add_runtime_dependency(%q<spreadsheet>, ["= 0.6.5.4"])
+      s.add_runtime_dependency(%q<google-spreadsheet-ruby>, ["= 0.1.5"])
+      s.add_runtime_dependency(%q<yajl-ruby>, ["= 0.8.2"])
+      s.add_runtime_dependency(%q<rinruby>, ["= 2.0.2"])
+      s.add_runtime_dependency(%q<ohm>, ["= 0.1.3"])
+      s.add_runtime_dependency(%q<ohm-contrib>, ["= 0.1.1"])
+      s.add_runtime_dependency(%q<SystemTimer>, ["= 1.2.3"])
+      s.add_runtime_dependency(%q<rjb>, ["= 1.3.4"])
+      s.add_runtime_dependency(%q<haml>, ["= 3.1.1"])
+      s.add_runtime_dependency(%q<akephalos>, ["= 0.2.5"])
+      s.add_runtime_dependency(%q<dm-core>, ["= 1.1.0"])
+      s.add_runtime_dependency(%q<dm-serializer>, ["= 1.1.0"])
+      s.add_runtime_dependency(%q<dm-timestamps>, ["= 1.1.0"])
+      s.add_runtime_dependency(%q<dm-types>, ["= 1.1.0"])
+      s.add_runtime_dependency(%q<dm-migrations>, ["= 1.1.0"])
+      s.add_runtime_dependency(%q<dm-validations>, ["= 1.1.0"])
+      s.add_runtime_dependency(%q<dm-sqlite-adapter>, ["= 1.1.0"])
+      s.add_runtime_dependency(%q<ruby-plot>, ["= 0.6.1"])
+      s.add_runtime_dependency(%q<gsl>, ["= 1.14.7"])
+      s.add_runtime_dependency(%q<statsample>, ["= 1.1.0"])
+      s.add_runtime_dependency(%q<redis>, ["= 2.2.2"])
       s.add_development_dependency(%q<jeweler>, [">= 0"])
     else
-      s.add_dependency(%q<sinatra>, [">= 0"])
-      s.add_dependency(%q<emk-sinatra-url-for>, [">= 0"])
-      s.add_dependency(%q<sinatra-respond_to>, [">= 0"])
-      s.add_dependency(%q<sinatra-static-assets>, [">= 0"])
-      s.add_dependency(%q<rest-client>, [">= 0"])
-      s.add_dependency(%q<rack>, [">= 0"])
-      s.add_dependency(%q<rack-contrib>, [">= 0"])
-      s.add_dependency(%q<rack-flash>, [">= 0"])
-      s.add_dependency(%q<nokogiri>, [">= 0"])
-      s.add_dependency(%q<rubyzip>, [">= 0"])
-      s.add_dependency(%q<roo>, [">= 0"])
-      s.add_dependency(%q<spreadsheet>, [">= 0"])
-      s.add_dependency(%q<google-spreadsheet-ruby>, [">= 0"])
-      s.add_dependency(%q<yajl-ruby>, [">= 0"])
-      s.add_dependency(%q<tmail>, [">= 0"])
-      s.add_dependency(%q<rinruby>, [">= 0"])
-      s.add_dependency(%q<ohm>, [">= 0"])
-      s.add_dependency(%q<ohm-contrib>, [">= 0"])
-      s.add_dependency(%q<SystemTimer>, [">= 0"])
-      s.add_dependency(%q<rjb>, [">= 0"])
-      s.add_dependency(%q<dm-core>, [">= 0"])
-      s.add_dependency(%q<dm-serializer>, [">= 0"])
-      s.add_dependency(%q<dm-timestamps>, [">= 0"])
-      s.add_dependency(%q<dm-types>, [">= 0"])
-      s.add_dependency(%q<dm-migrations>, [">= 0"])
-      s.add_dependency(%q<dm-validations>, [">= 0"])
-      s.add_dependency(%q<dm-sqlite-adapter>, [">= 0"])
-      s.add_dependency(%q<haml>, [">= 3"])
-      s.add_dependency(%q<ruby-plot>, ["~> 0.4.0"])
-      s.add_dependency(%q<statsample>, [">= 0"])
+      s.add_dependency(%q<sinatra>, ["= 1.2.6"])
+      s.add_dependency(%q<emk-sinatra-url-for>, ["= 0.2.1"])
+      s.add_dependency(%q<sinatra-respond_to>, ["= 0.7.0"])
+      s.add_dependency(%q<sinatra-static-assets>, ["= 0.5.0"])
+      s.add_dependency(%q<rest-client>, ["= 1.6.1"])
+      s.add_dependency(%q<rack>, ["= 1.3.5"])
+      s.add_dependency(%q<rack-contrib>, ["= 1.1.0"])
+      s.add_dependency(%q<rack-flash>, ["= 0.1.1"])
+      s.add_dependency(%q<nokogiri>, ["= 1.4.4"])
+      s.add_dependency(%q<rubyzip>, ["= 0.9.4"])
+      s.add_dependency(%q<roo>, ["= 1.9.3"])
+      s.add_dependency(%q<spreadsheet>, ["= 0.6.5.4"])
+      s.add_dependency(%q<google-spreadsheet-ruby>, ["= 0.1.5"])
+      s.add_dependency(%q<yajl-ruby>, ["= 0.8.2"])
+      s.add_dependency(%q<rinruby>, ["= 2.0.2"])
+      s.add_dependency(%q<ohm>, ["= 0.1.3"])
+      s.add_dependency(%q<ohm-contrib>, ["= 0.1.1"])
+      s.add_dependency(%q<SystemTimer>, ["= 1.2.3"])
+      s.add_dependency(%q<rjb>, ["= 1.3.4"])
+      s.add_dependency(%q<haml>, ["= 3.1.1"])
+      s.add_dependency(%q<akephalos>, ["= 0.2.5"])
+      s.add_dependency(%q<dm-core>, ["= 1.1.0"])
+      s.add_dependency(%q<dm-serializer>, ["= 1.1.0"])
+      s.add_dependency(%q<dm-timestamps>, ["= 1.1.0"])
+      s.add_dependency(%q<dm-types>, ["= 1.1.0"])
+      s.add_dependency(%q<dm-migrations>, ["= 1.1.0"])
+      s.add_dependency(%q<dm-validations>, ["= 1.1.0"])
+      s.add_dependency(%q<dm-sqlite-adapter>, ["= 1.1.0"])
+      s.add_dependency(%q<ruby-plot>, ["= 0.6.1"])
+      s.add_dependency(%q<gsl>, ["= 1.14.7"])
+      s.add_dependency(%q<statsample>, ["= 1.1.0"])
+      s.add_dependency(%q<redis>, ["= 2.2.2"])
       s.add_dependency(%q<jeweler>, [">= 0"])
     end
   else
-    s.add_dependency(%q<sinatra>, [">= 0"])
-    s.add_dependency(%q<emk-sinatra-url-for>, [">= 0"])
-    s.add_dependency(%q<sinatra-respond_to>, [">= 0"])
-    s.add_dependency(%q<sinatra-static-assets>, [">= 0"])
-    s.add_dependency(%q<rest-client>, [">= 0"])
-    s.add_dependency(%q<rack>, [">= 0"])
-    s.add_dependency(%q<rack-contrib>, [">= 0"])
-    s.add_dependency(%q<rack-flash>, [">= 0"])
-    s.add_dependency(%q<nokogiri>, [">= 0"])
-    s.add_dependency(%q<rubyzip>, [">= 0"])
-    s.add_dependency(%q<roo>, [">= 0"])
-    s.add_dependency(%q<spreadsheet>, [">= 0"])
-    s.add_dependency(%q<google-spreadsheet-ruby>, [">= 0"])
-    s.add_dependency(%q<yajl-ruby>, [">= 0"])
-    s.add_dependency(%q<tmail>, [">= 0"])
-    s.add_dependency(%q<rinruby>, [">= 0"])
-    s.add_dependency(%q<ohm>, [">= 0"])
-    s.add_dependency(%q<ohm-contrib>, [">= 0"])
-    s.add_dependency(%q<SystemTimer>, [">= 0"])
-    s.add_dependency(%q<rjb>, [">= 0"])
-    s.add_dependency(%q<dm-core>, [">= 0"])
-    s.add_dependency(%q<dm-serializer>, [">= 0"])
-    s.add_dependency(%q<dm-timestamps>, [">= 0"])
-    s.add_dependency(%q<dm-types>, [">= 0"])
-    s.add_dependency(%q<dm-migrations>, [">= 0"])
-    s.add_dependency(%q<dm-validations>, [">= 0"])
-    s.add_dependency(%q<dm-sqlite-adapter>, [">= 0"])
-    s.add_dependency(%q<haml>, [">= 3"])
-    s.add_dependency(%q<ruby-plot>, ["~> 0.4.0"])
-    s.add_dependency(%q<statsample>, [">= 0"])
+    s.add_dependency(%q<sinatra>, ["= 1.2.6"])
+    s.add_dependency(%q<emk-sinatra-url-for>, ["= 0.2.1"])
+    s.add_dependency(%q<sinatra-respond_to>, ["= 0.7.0"])
+    s.add_dependency(%q<sinatra-static-assets>, ["= 0.5.0"])
+    s.add_dependency(%q<rest-client>, ["= 1.6.1"])
+    s.add_dependency(%q<rack>, ["= 1.3.5"])
+    s.add_dependency(%q<rack-contrib>, ["= 1.1.0"])
+    s.add_dependency(%q<rack-flash>, ["= 0.1.1"])
+    s.add_dependency(%q<nokogiri>, ["= 1.4.4"])
+    s.add_dependency(%q<rubyzip>, ["= 0.9.4"])
+    s.add_dependency(%q<roo>, ["= 1.9.3"])
+    s.add_dependency(%q<spreadsheet>, ["= 0.6.5.4"])
+    s.add_dependency(%q<google-spreadsheet-ruby>, ["= 0.1.5"])
+    s.add_dependency(%q<yajl-ruby>, ["= 0.8.2"])
+    s.add_dependency(%q<rinruby>, ["= 2.0.2"])
+    s.add_dependency(%q<ohm>, ["= 0.1.3"])
+    s.add_dependency(%q<ohm-contrib>, ["= 0.1.1"])
+    s.add_dependency(%q<SystemTimer>, ["= 1.2.3"])
+    s.add_dependency(%q<rjb>, ["= 1.3.4"])
+    s.add_dependency(%q<haml>, ["= 3.1.1"])
+    s.add_dependency(%q<akephalos>, ["= 0.2.5"])
+    s.add_dependency(%q<dm-core>, ["= 1.1.0"])
+    s.add_dependency(%q<dm-serializer>, ["= 1.1.0"])
+    s.add_dependency(%q<dm-timestamps>, ["= 1.1.0"])
+    s.add_dependency(%q<dm-types>, ["= 1.1.0"])
+    s.add_dependency(%q<dm-migrations>, ["= 1.1.0"])
+    s.add_dependency(%q<dm-validations>, ["= 1.1.0"])
+    s.add_dependency(%q<dm-sqlite-adapter>, ["= 1.1.0"])
+    s.add_dependency(%q<ruby-plot>, ["= 0.6.1"])
+    s.add_dependency(%q<gsl>, ["= 1.14.7"])
+    s.add_dependency(%q<statsample>, ["= 1.1.0"])
+    s.add_dependency(%q<redis>, ["= 2.2.2"])
     s.add_dependency(%q<jeweler>, [">= 0"])
   end
 end