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| author | davor <vorgrimmlerdavid@gmx.de> | 2012-08-09 18:46:37 +0200 |
|---|---|---|
| committer | davor <vorgrimmlerdavid@gmx.de> | 2012-08-09 18:46:37 +0200 |
| commit | b4f15a67a41e0011bb56fd1dab0da42aba0fb0c3 (patch) | |
| tree | dabaedce3c86ae3f5a90c5e41cc6dd368617ff36 | |
| parent | 656ed75baca852623941dccf766ff1641dd71d55 (diff) | |
Added draft installation instructions.
| -rw-r--r-- | _posts/2012-08-09-install-opentox-development-environment.md | 45 |
1 files changed, 45 insertions, 0 deletions
diff --git a/_posts/2012-08-09-install-opentox-development-environment.md b/_posts/2012-08-09-install-opentox-development-environment.md new file mode 100644 index 0000000..1406408 --- /dev/null +++ b/_posts/2012-08-09-install-opentox-development-environment.md @@ -0,0 +1,45 @@ +--- +layout: post +title: "Install opentox development environment" +description: "" +category: General +tags: [deployment, installation, Ubuntu, Debian, Setup] +--- +{% include JB/setup %} + +HowTo install recent opentox services on Ubuntu or Debian + +# Installation: + +Installation (`development` at the point of writing this = 09/09/2012) is tested with Debian 6.0.5 and should work with recent Ubuntu versions. Installer is available at github. Please follow instruction: + + sudo apt-get install git-core + # please add you ssh keys at github. You may add your name/email adress to the local git config. + cd ~ + git clone git@github.com:opentox/install.git + cd install + git checkout development + # check config.sh + ./install + +This installation script will prepare your system for the opentox services, including installing necessary dependencies, opentox config, raptor, rasqal and 4store. + +# Install opentox services + + cd $OT_PREFIX # check path in config.sh + # Download opentox-client opentox-server opentox-test algorithm dataset feature and task + for f in opentox-client opentox-server opentox-test algorithm dataset feature task; do git clone "git@github.com:opentox/$f.git"; cd $f; git checkout development; git checkout migration; cd ..; done + # install services with script (bundle) + cd $OT_PREFIX/opentox-client/bin + ./opentox-client-install + cd $OT_PREFIX/opentox-server/bin + ./opentox-server-install + for f in algorithm dataset feature task; do cd $f/bin; ./$f-install; cd ../..; done + +# Add ot-tools to your .bashrc + + echo '. ~/install/ot-tools-user.sh' >> ~/.bashrc + +# Run services + + otstart all |