diff options
author | davor <vorgrimmlerdavid@gmx.de> | 2012-08-22 13:24:46 +0200 |
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committer | davor <vorgrimmlerdavid@gmx.de> | 2012-08-22 13:24:46 +0200 |
commit | a546090f652c9b5b91e98de98265f11edf4656c2 (patch) | |
tree | e189d08cb823e2cb0769a6e685509dec81ef3031 /_posts/2012-08-09-install-opentox-development-environment.md | |
parent | 5be1bbe2534c2d2b89f987854b12053c0f939b29 (diff) |
Rm separated 4S backends.
Diffstat (limited to '_posts/2012-08-09-install-opentox-development-environment.md')
-rw-r--r-- | _posts/2012-08-09-install-opentox-development-environment.md | 58 |
1 files changed, 18 insertions, 40 deletions
diff --git a/_posts/2012-08-09-install-opentox-development-environment.md b/_posts/2012-08-09-install-opentox-development-environment.md index 04741f6..bed98ca 100644 --- a/_posts/2012-08-09-install-opentox-development-environment.md +++ b/_posts/2012-08-09-install-opentox-development-environment.md @@ -38,7 +38,7 @@ Conceptual approach: # Installation -Installation (`development` at the point of writing this = 20/08/2012) is tested with Debian 6.0.5 and should work with recent Ubuntu versions. Installer is available at [github](https://github.com/opentox/install). +Installation (`development` at the point of writing this = 22/08/2012) is tested with Debian 6.0.5 and should work with recent Ubuntu versions. Installer is available at [github](https://github.com/opentox/install). Before starting the installation please check if "sudo" is available (e.g. sudo ls), required for base packages. @@ -83,6 +83,7 @@ OpenTox services(algorithm compound dataset feature task opentox-test) and tests git clone "git@github.com:opentox/$f.git" $OT_PREFIX/$f cd $OT_PREFIX/$f git checkout development 2>/dev/null + git checkout migration 2>/dev/null if [ -f $OT_PREFIX/$f/bin/$f-install ] then cd $OT_PREFIX/$f/bin ./$f-install @@ -107,54 +108,31 @@ All ot-tools (`otconfig`, `otstart`, `otcheck`, `otreload`, `otkill`) are availa `otconfig` is the only command not taking an argument, it sets the environment variables for all services. -Start all services and their 4store backends with: +Start all services and the 4store backend with: otstart all -Kill all services and their 4store backends with: +Kill all services and the 4store backend with: otkill all -It is possible to manage single services and its 4store backend(e.g. `otstart dataset` to run dataset web service). +It is possible to manage single services (e.g. `otstart dataset` to run dataset web service). # Access web services -The default port setting for the web services and their 4store backends, (see config files `~/.opentox/config/\*.rb`): - -<table border="1"> -<tr> -<th>Service</th> -<th>URI</th> -</tr> -<tr> -<td>Algorithm<br>Algorithm 4store backend</td> -<td>localhost:8081/algorithm<br>localhost:9081</td> -</tr> -<tr> -<td>Compound<br>Compound 4store backend</td> -<td>localhost:8082/compound<br>localhost:9082</td> -</tr> -<tr> -<td>Dataset<br>Dataset 4store backend</td> -<td>localhost:8083/dataset<br>localhost:9083</td> -</tr> -<tr> -<td>Feature<br>Feature 4store backend</td> -<td>localhost:8084/feature<br>localhost:9084</td> -</tr> -<tr> -<td>Model<br>Model 4store backend</td> -<td>localhost:8085/model<br>localhost:9085</td> -</tr> -<tr> -<td>Task<br>Task 4store backend</td> -<td>localhost:8086/task<br>localhost:9086</td> -</tr> -<tr> -<td>Validation<br>Validation 4store backend</td> -<td>localhost:8087/validation<br>localhost:9087</td> -</tr> -</table> +The default port setting for the web services and the 4store backend, (see config files `~/.opentox/config/\*.rb`): + +| Service | URI | +| ------ | ------ | +| -------------------- | ------------------------------------- | +| Algorithm | localhost:8081/algorithm | +| Compound | localhost:8082/compound | +| Dataset | localhost:8083/dataset | +| Feature | localhost:8084/feature | +| Model | localhost:8085/model | +| Task | localhost:8086/task | +| Validation | localhost:8087/validation | +| 4store | localhost:9088/ | NOTE: Only installed service URIs are set in the config files. Model and validation service are not available yet. |