diff options
author | Christoph Helma <helma@in-silico.de> | 2009-11-27 18:18:31 +0100 |
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committer | Christoph Helma <helma@in-silico.de> | 2009-11-27 18:18:31 +0100 |
commit | 45802e0a9b7ef6a918c4b7a539261bdba8217d38 (patch) | |
tree | c5668eefed20c1c06e5a138f003d42acdfe1425b | |
parent | 5dfa70ed7ee259a75bea0f54b83ccfce79e591e0 (diff) |
model creation steps fixed
-rw-r--r-- | features/step_definitions/common_steps.rb | 1 | ||||
-rw-r--r-- | features/step_definitions/dataset_steps.rb | 0 | ||||
-rw-r--r-- | features/step_definitions/lazar_steps.rb | 5 |
3 files changed, 4 insertions, 2 deletions
diff --git a/features/step_definitions/common_steps.rb b/features/step_definitions/common_steps.rb index 41985b3..e2d9f09 100644 --- a/features/step_definitions/common_steps.rb +++ b/features/step_definitions/common_steps.rb @@ -15,6 +15,7 @@ end Then /^I should receive a valid URI$/ do @response = RestClient.get @uri + #puts @response end Then /^the URI should contain (.+)$/ do |result| diff --git a/features/step_definitions/dataset_steps.rb b/features/step_definitions/dataset_steps.rb deleted file mode 100644 index e69de29..0000000 --- a/features/step_definitions/dataset_steps.rb +++ /dev/null diff --git a/features/step_definitions/lazar_steps.rb b/features/step_definitions/lazar_steps.rb index bc84159..3992bf9 100644 --- a/features/step_definitions/lazar_steps.rb +++ b/features/step_definitions/lazar_steps.rb @@ -2,8 +2,10 @@ When /^I create a lazar model for (.*)$/ do |feature_uri| training_uri = @uri feature_uri = RestClient.post File.join(@@config[:services]["opentox-algorithm"], "fminer"), :dataset_uri => training_uri, :feature_uri => feature_uri @resources << feature_uri - @uri = RestClient.post File.join(@@config[:services]["opentox-model"], "lazar"), :activity_dataset_uri => training_uri, :feature_dataset_uri => feature_uri + #puts File.join(@@config[:services]["opentox-algorithm"], "lazar")+ ":activity_dataset_uri => #{training_uri}, :feature_dataset_uri => #{feature_uri}" + @uri = RestClient.post File.join(@@config[:services]["opentox-algorithm"], "lazar"), :activity_dataset_uri => training_uri, :feature_dataset_uri => feature_uri @resources << @uri + #puts @uri.to_yaml end Then /^the model should predict (.*) for (.*)$/ do |activity,smiles| @@ -11,7 +13,6 @@ Then /^the model should predict (.*) for (.*)$/ do |activity,smiles| puts @uri prediction = RestClient.post @uri, :compound_uri => compound_uri puts prediction - #prediction = RestClient.get prediction_uri #assert_equal activity.to_s, YAML.load(prediction)[:values]['classification'].to_s end |