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authorChristoph Helma <helma@in-silico.ch>2011-02-23 10:34:45 +0100
committerChristoph Helma <helma@in-silico.ch>2011-02-23 10:34:45 +0100
commit182f3e9f34026934626ceff42902274f2e6f046c (patch)
tree45834ead3d416e871c8881bb6add353827de1a65 /dataset.rb
parent545f4f9e511d8e39a808a1c24de37eb33d2f026e (diff)
error handling fixed
Diffstat (limited to 'dataset.rb')
-rw-r--r--dataset.rb11
1 files changed, 6 insertions, 5 deletions
diff --git a/dataset.rb b/dataset.rb
index d15baf7..a243b00 100644
--- a/dataset.rb
+++ b/dataset.rb
@@ -5,6 +5,8 @@ require 'validate-owl'
class DatasetTest < Test::Unit::TestCase
+=begin
+=end
def setup
@datasets = {
@@classification_training_dataset.uri => {
@@ -26,7 +28,6 @@ class DatasetTest < Test::Unit::TestCase
#@new_dataset.delete
end
-=begin
def test_save_external
@dataset = OpenTox::Dataset.find "http://apps.ideaconsult.net:8080/ambit2/dataset/2698", @@subjectid
@@ -37,13 +38,13 @@ class DatasetTest < Test::Unit::TestCase
#@dataset.load_csv(File.open("data/hamster_carcinogenicity.csv").read)
#@dataset.save
end
-=end
def test_create
dataset = OpenTox::Dataset.create(CONFIG[:services]["opentox-dataset"], @@subjectid)
dataset.save(@@subjectid)
assert_kind_of URI::HTTP, URI.parse(dataset.uri)
- dataset.delete(@@subjectid)
+ puts `curl #{dataset.uri}`
+ #dataset.delete(@@subjectid)
end
def test_all
@@ -65,14 +66,14 @@ class DatasetTest < Test::Unit::TestCase
end
def test_rest_csv
- uri = OpenTox::RestClientWrapper.post(CONFIG[:services]["opentox-dataset"],{:accept => "text/uri-list"}, {:file => File.new("data/hamster_carcinogenicity.csv"), :subjectid => @@subjectid}).to_s.chomp
+ uri = OpenTox::RestClientWrapper.post(CONFIG[:services]["opentox-dataset"], {:file => File.new("data/hamster_carcinogenicity.csv")} ,{:accept => "text/uri-list", :subjectid => @@subjectid}).to_s.chomp
@dataset = OpenTox::Dataset.new uri, @@subjectid
@dataset.load_all(@@subjectid)
hamster_carc?
end
def test_multicolumn_csv
- uri = OpenTox::RestClientWrapper.post(CONFIG[:services]["opentox-dataset"],{:accept => "text/uri-list"}, {:file => File.new("data/multicolumn.csv"), :subjectid => @@subjectid}).to_s.chomp
+ uri = OpenTox::RestClientWrapper.post(CONFIG[:services]["opentox-dataset"], {:file => File.new("data/multicolumn.csv")},{:accept => "text/uri-list", :subjectid => @@subjectid}).to_s.chomp
@dataset = OpenTox::Dataset.new uri, @@subjectid
@dataset.load_all(@@subjectid)
assert_equal 5, @dataset.features.size