diff options
author | mr <mr@mrautenberg.de> | 2010-12-16 11:06:53 +0100 |
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committer | mr <mr@mrautenberg.de> | 2010-12-16 11:06:53 +0100 |
commit | 54d90f5a1c22fb06e0b4b1e86e36b9975ab4d2e4 (patch) | |
tree | ab56b8ce6838f3f7c1bbb3a74a8c73db3220ab37 /fminer.rb | |
parent | 1bc0f0d200cd25102d032dbce85e23c706e6ae72 (diff) |
A&A for fminer
Diffstat (limited to 'fminer.rb')
-rw-r--r-- | fminer.rb | 16 |
1 files changed, 8 insertions, 8 deletions
@@ -9,40 +9,40 @@ class FminerTest < Test::Unit::TestCase =end def test_bbrc feature = @@classification_training_dataset.features.keys.first - dataset_uri = OpenTox::Algorithm::Fminer::BBRC.new.run({:dataset_uri => @@classification_training_dataset.uri, :prediction_feature => feature}).to_s + dataset_uri = OpenTox::Algorithm::Fminer::BBRC.new.run({:dataset_uri => @@classification_training_dataset.uri, :prediction_feature => feature, :subjectid => @@subjectid}).to_s d =OpenTox::Dataset.new dataset_uri d.load_features assert_equal 41, d.features.size #validate_owl - d.delete + d.delete(@@subjectid) end def test_last feature = @@classification_training_dataset.features.keys.first - dataset_uri = OpenTox::Algorithm::Fminer::LAST.new.run({:dataset_uri => @@classification_training_dataset.uri, :prediction_feature => feature}).to_s + dataset_uri = OpenTox::Algorithm::Fminer::LAST.new.run({:dataset_uri => @@classification_training_dataset.uri, :prediction_feature => feature, :subjectid => @@subjectid}).to_s d =OpenTox::Dataset.new dataset_uri d.load_features assert_equal 35, d.features.size #validate_owl - d.delete + d.delete(@@subjectid) end def test_regression_bbrc feature = File.join @@regression_training_dataset.uri,"feature/LC50_mmol" - dataset_uri = OpenTox::Algorithm::Fminer::BBRC.new.run({:dataset_uri => @@regression_training_dataset.uri, :prediction_feature => feature}).to_s + dataset_uri = OpenTox::Algorithm::Fminer::BBRC.new.run({:dataset_uri => @@regression_training_dataset.uri, :prediction_feature => feature, :subjectid => @@subjectid}).to_s d =OpenTox::Dataset.new dataset_uri d.load_features assert_equal 222, d.features.size - d.delete + d.delete(@@subjectid) end def test_regression_last feature = File.join @@regression_training_dataset.uri,"feature/LC50_mmol" - dataset_uri = OpenTox::Algorithm::Fminer::LAST.new.run({:dataset_uri => @@regression_training_dataset.uri, :prediction_feature => feature}).to_s + dataset_uri = OpenTox::Algorithm::Fminer::LAST.new.run({:dataset_uri => @@regression_training_dataset.uri, :prediction_feature => feature, :subjectid => @@subjectid}).to_s d =OpenTox::Dataset.new dataset_uri d.load_features assert_equal 16, d.features.size - d.delete + d.delete(@@subjectid) end =begin =end |