diff options
Diffstat (limited to 'LOAEL/CV_ds_pctype_algo_rseed_LOAEL_loo_dv.rb')
| -rw-r--r-- | LOAEL/CV_ds_pctype_algo_rseed_LOAEL_loo_dv.rb | 3 |
1 files changed, 2 insertions, 1 deletions
diff --git a/LOAEL/CV_ds_pctype_algo_rseed_LOAEL_loo_dv.rb b/LOAEL/CV_ds_pctype_algo_rseed_LOAEL_loo_dv.rb index d969164..24ca10c 100644 --- a/LOAEL/CV_ds_pctype_algo_rseed_LOAEL_loo_dv.rb +++ b/LOAEL/CV_ds_pctype_algo_rseed_LOAEL_loo_dv.rb @@ -41,6 +41,7 @@ algo_params = "prediction_algorithm=#{algo}" algo_params += ";pc_type=#{pc_type}" unless (pc_type == "nil") || (pc_ds_uri.include? 'pc_type') algo_params += ";feature_dataset_uri=#{pc_ds_uri}" unless (pc_type == "nil") || (pc_ds_uri.include? 'feature_dataset_uri') algo_params += "#{user_algo_params}" unless user_algo_params == "nil" +algo_params += ";lib=cdk" #algo_params += ";min_chisq_significance=0.9" #algo_params += ";min_frequency=6" #algo_params += ";feature_type=trees" @@ -54,7 +55,7 @@ prediction_feature = OpenTox::Dataset.find(ds_uri).features.keys.first cv_args = {} cv_args[:dataset_uri] = ds_uri cv_args[:prediction_feature] = prediction_feature -cv_args[:algorithm_uri] = "http://toxcreate3.in-silico.ch:8085/algorithm/lazar" +cv_args[:algorithm_uri] = File.join(CONFIG[:services]["opentox-algorithm"],"lazar") cv_args[:algorithm_params] = algo_params cv_args[:loo] = true puts "[#{Time.now.utc.iso8601(4).to_s}] #{cv_args.to_yaml}" |