diff options
Diffstat (limited to 'application.rb')
| -rw-r--r-- | application.rb | 38 |
1 files changed, 5 insertions, 33 deletions
diff --git a/application.rb b/application.rb index 57503db..42389f2 100644 --- a/application.rb +++ b/application.rb @@ -530,20 +530,7 @@ post '/predict/?' do # post chemical name to model prediction_dataset = OpenTox::LazarPrediction.find(prediction_dataset_uri, @subjectid) if prediction_dataset.metadata[OT.hasSource].match(/dataset/) - if model.name.downcase.include? "ptd50" - mw = calc_mw(@compound.uri) - td50 = ptd50_to_td50(prediction_dataset.measured_activities(@compound).first.to_f, mw) - prediction_trans = "TD50: #{td50}" - elsif model.name.downcase.include? "loael" - if model.name.downcase.include? "mol" - mw = calc_mw(@compound.uri) - mg = logmmol_to_mg(prediction_dataset.measured_activities(@compound).first.to_f, mw) - prediction_trans = "mg/kg bw/day: #{mg}" - elsif model.name.downcase.include? "mg" - mg = logmg_to_mg(prediction_dataset.measured_activities(@compound).first.to_f) - prediction_trans = "mg/kg bw/day: #{mg}" - end - end + prediction_trans = transform(prediction_dataset.measured_activities(@compound).first.to_f, @compound.uri, model.name.downcase, false) if prediction_trans.nil? @predictions << { :title => model.name, @@ -552,8 +539,7 @@ post '/predict/?' do # post chemical name to model else @predictions << { :title => model.name, - :measured_activities => prediction_dataset.measured_activities(@compound), - :prediction_transformed => prediction_trans + :measured_activities => "#{round_to(prediction_dataset.measured_activities(@compound).first, 4)}, \n#{prediction_trans}" } end else @@ -570,20 +556,7 @@ post '/predict/?' do # post chemical name to model :error => "Not enough similar compounds in training dataset." } else - if model.name.downcase.include? "ptd50" - mw = calc_mw(@compound.uri) - td50 = ptd50_to_td50(prediction_dataset.value(@compound), mw) - prediction_trans = "TD50: #{td50}" - elsif model.name.downcase.include? "loael" - if model.name.downcase.include? "mol" - mw = calc_mw(@compound.uri) - mg = logmmol_to_mg(prediction_dataset.value(@compound), mw) - prediction_trans = "mg/kg bw/day: #{mg}" - elsif model.name.downcase.include? "mg" - mg = logmg_to_mg(prediction_dataset.value(@compound)) - prediction_trans = "mg/kg bw/day: #{mg}" - end - end + prediction_trans = transform(prediction_dataset.value(@compound), @compound.uri, model.name.downcase, false) if prediction_trans.nil? @predictions << { :title => model.name, @@ -595,9 +568,8 @@ post '/predict/?' do # post chemical name to model @predictions << { :title => model.name, :model_uri => model.uri, - :prediction => prediction_dataset.value(@compound), - :confidence => prediction_dataset.confidence(@compound), - :prediction_transformed => prediction_trans + :prediction => "#{round_to(prediction_dataset.value(@compound), 4)}, \n#{prediction_trans}", + :confidence => prediction_dataset.confidence(@compound) } end end |