diff options
author | Martin Gütlein <martin.guetlein@gmail.com> | 2010-04-19 14:22:33 +0200 |
---|---|---|
committer | Martin Gütlein <martin.guetlein@gmail.com> | 2010-04-19 14:22:33 +0200 |
commit | 0e017bd29cd27bc5f4588ed8d4b50f6706f3696b (patch) | |
tree | 84645be3ce66a2999384e9f25bb659a42d7def9d /example.rb | |
parent | a35e4d1540b74d6687529b43c1c6e5b85deb680e (diff) |
added nightly report
Diffstat (limited to 'example.rb')
-rw-r--r-- | example.rb | 11 |
1 files changed, 6 insertions, 5 deletions
@@ -1,4 +1,6 @@ +require 'lib/test_util.rb' + class Example @@file=File.new("data/hamster_carcinogenicity.yaml","r") @@ -10,7 +12,7 @@ class Example @@data=File.join @@config[:services]["opentox-dataset"],"1" @@train_data=File.join @@config[:services]["opentox-dataset"],"2" @@test_data=File.join @@config[:services]["opentox-dataset"],"3" - @@css_file="http://apps.ideaconsult.net:8180/ToxPredict/style/global.css" + @@css_file="http://apps.ideaconsult.net:8080/ToxPredict/style/global.css" @@summary="" @@ -55,8 +57,7 @@ class Example log "upload dataset" halt 400,"File not found: "+@@file.path.to_s unless File.exist?(@@file.path) data = File.read(@@file.path) - data_uri = OpenTox::RestClientWrapper.post @@config[:services]["opentox-dataset"], data, :content_type => @@file_type - data_uri = OpenTox::Task.find(data_uri).wait_for_resource.to_s if OpenTox::Utils.task_uri?(data_uri) + data_uri = OpenTox::RestClientWrapper.post(@@config[:services]["opentox-dataset"],data,{:content_type => @@file_type},true).chomp("\n") log "train-test-validation" Lib::Validation.auto_migrate! @@ -66,7 +67,7 @@ class Example split_params = Validation::Util.train_test_dataset_split(data_uri, URI.decode(@@feature), 0.9, 1) v = Validation::Validation.new :training_dataset_uri => split_params[:training_dataset_uri], :test_dataset_uri => split_params[:test_dataset_uri], - :test_class_dataset_uri => data_uri, + :test_target_dataset_uri => data_uri, :prediction_feature => URI.decode(@@feature), :algorithm_uri => @@alg v.validate_algorithm( @@alg_params ) @@ -134,7 +135,7 @@ class Example if ($?==0) if OpenTox::Utils.task_uri?(result) log "wait for task: "+result - result = OpenTox::Task.find(result).wait_for_resource.to_s + result = Lib::TestUtil.wait_for_task(result) end log "ok ( " +result.to_s[0,50]+" )" suc += 1 |