diff options
author | mguetlein <martin.guetlein@gmail.com> | 2011-01-19 16:12:21 +0100 |
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committer | mguetlein <martin.guetlein@gmail.com> | 2011-01-19 16:12:21 +0100 |
commit | 7b06ce45180a5b2c0dd0095cd1a60ec974b46aa5 (patch) | |
tree | 39d34044b9879d1bd22df1cc9005fcbe6a0afb00 /example.rb | |
parent | bba009c7c59655392236e1cdaf873117bb59600f (diff) |
aa suport, rdf support
Diffstat (limited to 'example.rb')
-rwxr-xr-x | example.rb | 12 |
1 files changed, 8 insertions, 4 deletions
@@ -6,9 +6,9 @@ class Example @@file=File.new("data/hamster_carcinogenicity.yaml","r") @@file_type="text/x-yaml" @@model=File.join CONFIG[:services]["opentox-model"],"1" - #@@feature= URI.encode("http://localhost/toxmodel/feature#Hamster%20Carcinogenicity%20(DSSTOX/CPDB)") + #@@feature= URI.encode("http://local-ot/toxmodel/feature#Hamster%20Carcinogenicity%20(DSSTOX/CPDB)") @@feature= File.join CONFIG[:services]["opentox-dataset"],"1/feature/hamster_carcinogenicity" - #@@predicted_feature= URI.encode("http://localhost/toxmodel/feature#Hamster%20Carcinogenicity%20(DSSTOX/CPDB)_lazar_classification") + #@@predicted_feature= URI.encode("http://local-ot/toxmodel/feature#Hamster%20Carcinogenicity%20(DSSTOX/CPDB)_lazar_classification") @@alg = File.join CONFIG[:services]["opentox-algorithm"],"lazar" @@alg_params = "feature_generation_uri="+File.join(CONFIG[:services]["opentox-algorithm"],"fminer/bbrc") @@data=File.join CONFIG[:services]["opentox-dataset"],"1" @@ -54,6 +54,10 @@ class Example # creates the resources that are requested by the examples def self.prepare_example_resources + + #TODO + subjectid = nil + task = OpenTox::Task.create("prepare examples", "n/a") do |task| @@summary = "" #delete validations @@ -103,12 +107,12 @@ class Example log "create validation report" rep = Reports::ReportService.instance(File.join(CONFIG[:services]["opentox-validation"],"report")) - rep.delete_all_reports("validation") + rep.delete_all_reports("validation", subjectid) rep.create_report("validation",v.validation_uri) task.progress(80) log "create crossvalidation report" - rep.delete_all_reports("crossvalidation") + rep.delete_all_reports("crossvalidation", subjectid) rep.create_report("crossvalidation",cv.crossvalidation_uri) task.progress(90) |