diff options
Diffstat (limited to 'report/prediction_util.rb')
| -rw-r--r-- | report/prediction_util.rb | 45 |
1 files changed, 0 insertions, 45 deletions
diff --git a/report/prediction_util.rb b/report/prediction_util.rb deleted file mode 100644 index 5ba3716..0000000 --- a/report/prediction_util.rb +++ /dev/null @@ -1,45 +0,0 @@ - - -module Reports::PredictionUtil - - # creates an Array for a table - # * first row: header values - # * other rows: the prediction values - # additional attribute values of the validation that should be added to the table can be defined via validation_attributes - # - # call-seq: - # predictions_to_array(validation_set, validation_attributes=[]) => Array - # - def self.predictions_to_array(validation_set, validation_attributes=[]) - - res = [] - - validation_set.validations.each do |v| - (0..v.get_predictions.num_instances-1).each do |i| - a = [] - validation_attributes.each{ |att| a.push(v.send(att).to_s) } - - #PENDING! - a.push( "http://ambit.uni-plovdiv.bg:8080/ambit2/depict/cdk?search="+URI.encode(OpenTox::Compound.new(:uri=>v.get_predictions.identifier(i)).smiles) ) - - a.push(v.get_predictions.actual_value(i).to_nice_s) - a.push(v.get_predictions.predicted_value(i).to_nice_s) - a.push(v.get_predictions.classification_miss?(i)?"X":"") if validation_set.all_classification? - a.push(v.get_predictions.confidence_value(i).to_nice_s) if v.get_predictions.confidence_values_available? - a.push(v.get_predictions.identifier(i)) #.gsub(/[-(),=]/, '')[0,10]) - res.push(a) - end - end - - #res = res.sort{|x,y| y[3] <=> x[3] } - header = [ "compound", "actual value", "predicted value"] - header.push "missclassified" if validation_set.all_classification? - header.push "confidence value" if validation_set.validations[0].get_predictions.confidence_values_available? - header << "compound-uri" - res.insert(0, validation_attributes + header) - #puts res.collect{|c| c.inspect}.join("\n") - - return res - end - -end |