summaryrefslogtreecommitdiff
path: root/README
diff options
context:
space:
mode:
Diffstat (limited to 'README')
-rw-r--r--README18
1 files changed, 12 insertions, 6 deletions
diff --git a/README b/README
index 5182758..8d515d2 100644
--- a/README
+++ b/README
@@ -6,7 +6,8 @@ OpenTox Algorithm
- fminer
- lazar
-REST operations:
+REST operations
+---------------
Get a list of all algorithms GET / - URIs of algorithms 200
Get a representation of the GET /fminer - fminer representation 200,404
@@ -19,11 +20,13 @@ Create lazar model POST /lazar dataset_uri, URI for laza
prediction_feature,
feature_generation_uri
-Supported MIME formats (http://chemical-mime.sourceforge.net/):
+Supported MIME formats (http://chemical-mime.sourceforge.net/)
+--------------------------------------------------------------
* application/rdf+xml (default): read/write OWL-DL
-Examples:
+Examples
+--------
Get the OWL-DL representation of fminer
curl http://webservices.in-silico.ch/algorithm/fminer
@@ -33,7 +36,7 @@ Get the OWL-DL representation of lazar
Create fminer features
curl -X POST -d dataset_uri={datset_uri} -d prediction_feature={feature_uri} http://webservices.in-silico.ch/algorithm/fminer
- (feaure_uri specifies the dependent variable, e.g. http://www.epa.gov/NCCT/dsstox/CentralFieldDef.html#ActivityOutcome_CPDBAS_Hamster)
+ (feature_uri specifies the dependent variable, e.g. http://www.epa.gov/NCCT/dsstox/CentralFieldDef.html#ActivityOutcome_CPDBAS_Hamster)
Creates a dataset with fminer features (backbone refinement class representatives from supervised graph mining, see http://www.maunz.de/libfminer-doc/). These features can be used e.g. as structural alerts, as descriptors (fingerprints) for prediction models or for similarity calculations.
@@ -41,7 +44,10 @@ Create lazar model
curl -X POST -d dataset_uri={datset_uri} -d prediction_feature={feature_uri} -d feature_generation_uri=http://webservices.in-silico.ch/algorithm/fminer http://webservices.in-silico.ch/test/algorithm/lazar
(feaure_uri specifies the dependent variable, e.g. http://www.epa.gov/NCCT/dsstox/CentralFieldDef.html#ActivityOutcome_CPDBAS_Hamster)
-More documentation: Source code (application.rb, fminer.rb, lazar.rb)
+API documentation
+-----------------
+
+http://rdoc.info/github/opentox/algorithm
-Copyright (c) 2009 Christoph Helma. See LICENSE for details.
+Copyright (c) 2009-2011 Christoph Helma, Martin Guetlein, Micha Rautenberg, Andreas Maunz, David Vorgrimmler, Denis Gebele. See LICENSE for details.