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@@ -1,53 +0,0 @@ -OpenTox Algorithm -================= - -* An OpenTox REST Webservice (http://www.opentox.org) -* Implements the OpenTox algorithm API for - - fminer - - lazar - -REST operations ---------------- - -Get a list of all algorithms GET / - URIs of algorithms 200 -Get a representation of the GET /fminer - fminer representation 200,404 -fminer algorithm -Get a representation of the GET /lazar - lazar representation 200,404 -lazar algorithm -Create fminer features POST /fminer dataset_uri, URI for feature dataset 200,400,404,500 - feature_uri -Create lazar model POST /lazar dataset_uri, URI for lazar model 200,400,404,500 - prediction_feature, - feature_generation_uri - -Supported MIME formats (http://chemical-mime.sourceforge.net/) --------------------------------------------------------------- - - * application/rdf+xml (default): read/write OWL-DL - -Examples --------- - -Get the OWL-DL representation of fminer - curl http://webservices.in-silico.ch/algorithm/fminer - -Get the OWL-DL representation of lazar - curl http://webservices.in-silico.ch/algorithm/lazar - -Create fminer features - curl -X POST -d dataset_uri={datset_uri} -d prediction_feature={feature_uri} http://webservices.in-silico.ch/algorithm/fminer - (feature_uri specifies the dependent variable, e.g. http://www.epa.gov/NCCT/dsstox/CentralFieldDef.html#ActivityOutcome_CPDBAS_Hamster) - - Creates a dataset with fminer features (backbone refinement class representatives from supervised graph mining, see http://www.maunz.de/libfminer-doc/). These features can be used e.g. as structural alerts, as descriptors (fingerprints) for prediction models or for similarity calculations. - -Create lazar model - curl -X POST -d dataset_uri={datset_uri} -d prediction_feature={feature_uri} -d feature_generation_uri=http://webservices.in-silico.ch/algorithm/fminer http://webservices.in-silico.ch/test/algorithm/lazar - (feaure_uri specifies the dependent variable, e.g. http://www.epa.gov/NCCT/dsstox/CentralFieldDef.html#ActivityOutcome_CPDBAS_Hamster) - -API documentation ------------------ - -http://rdoc.info/github/opentox/algorithm - -Copyright (c) 2009-2011 Christoph Helma, Martin Guetlein, Micha Rautenberg, Andreas Maunz, David Vorgrimmler, Denis Gebele. See LICENSE for details. - |