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module OpenTox
module Algorithm
class Fminer < OpenTox
# Create a new dataset with BBRC features
def self.create(training_dataset_uri)
RestClient.post @@config[:services]["opentox-fminer"], :dataset_uri => training_dataset_uri
end
end
class Similarity < OpenTox
def self.tanimoto(dataset1,compound1,dataset2,compound2)
RestClient.get File.join(@@config[:services]["opentox-dataset"], 'algorithm/tanimoto/dataset',dataset1.name,compound1.inchi,'dataset',dataset2.name,compound2.inchi)
end
def self.weighted_tanimoto(dataset1,compound1,dataset2,compound2)
RestClient.get URI.encode(File.join(@@config[:services]["opentox-dataset"], 'algorithm/weighted_tanimoto/dataset',dataset1.name,'compound',compound1.inchi,'dataset',dataset2.name,'compound',compound2.inchi))
end
end
class Lazar < OpenTox
# Create a new prediction model from a dataset
def initialize(params)
@uri = RestClient.post @@config[:services]["opentox-lazar"] + 'models' , :dataset_uri => params[:dataset_uri]
end
end
end
end
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