diff options
| author | gebele <gebele@in-silico.ch> | 2015-10-13 09:11:57 +0000 |
|---|---|---|
| committer | gebele <gebele@in-silico.ch> | 2015-10-13 09:11:57 +0000 |
| commit | 3a05be7bec574ac6b9e037509a702f2446de14db (patch) | |
| tree | 0f5e0cde5f0756c222df6553a37066c55a220977 | |
| parent | 6f930be7439ab7bdc25613d494fab34f6ad41d3f (diff) | |
updated LOAEL metadata
| -rw-r--r-- | create_nestec_models.rb | 10 | ||||
| -rw-r--r-- | dump/production/compounds.bson | bin | 853904 -> 857449 bytes | |||
| -rw-r--r-- | dump/production/fs.chunks.bson | bin | 1388508 -> 1811703 bytes | |||
| -rw-r--r-- | dump/production/fs.files.bson | bin | 54600 -> 78673 bytes | |||
| -rw-r--r-- | dump/production/open_tox_model_predictions.bson | bin | 810 -> 817 bytes | |||
| -rw-r--r-- | dump/production/system.indexes.bson | bin | 1005 -> 1005 bytes | |||
| -rw-r--r-- | regression/LOAEL_mmol_corrected_smiles.json | 2 |
7 files changed, 7 insertions, 5 deletions
diff --git a/create_nestec_models.rb b/create_nestec_models.rb index 75bc237..0717ce0 100644 --- a/create_nestec_models.rb +++ b/create_nestec_models.rb @@ -2,13 +2,15 @@ require_relative '../lazar/lib/lazar' include OpenTox #$mongo.database.drop #$gridfs = $mongo.database.fs # recreate GridFS indexes - +#=begin [ - #"Rat_TD50.csv", - #"Mouse_TD50.csv", + "Rat_TD50.csv", + "Mouse_TD50.csv", "LOAEL_mmol_corrected_smiles.csv" ].each do |file| file = File.join(File.dirname(__FILE__),"regression",file) Model::Prediction.from_csv_file file end -`mongodump -h 127.0.0.1 -d opentox` +#=end +`mongodump -h 127.0.0.1 -d production` +#`mongorestore --host 127.0.0.1` diff --git a/dump/production/compounds.bson b/dump/production/compounds.bson Binary files differindex e4974fe..2a662fe 100644 --- a/dump/production/compounds.bson +++ b/dump/production/compounds.bson diff --git a/dump/production/fs.chunks.bson b/dump/production/fs.chunks.bson Binary files differindex 224d799..3dceeb1 100644 --- a/dump/production/fs.chunks.bson +++ b/dump/production/fs.chunks.bson diff --git a/dump/production/fs.files.bson b/dump/production/fs.files.bson Binary files differindex ac97ece..9560a0a 100644 --- a/dump/production/fs.files.bson +++ b/dump/production/fs.files.bson diff --git a/dump/production/open_tox_model_predictions.bson b/dump/production/open_tox_model_predictions.bson Binary files differindex a8e2d27..ad22663 100644 --- a/dump/production/open_tox_model_predictions.bson +++ b/dump/production/open_tox_model_predictions.bson diff --git a/dump/production/system.indexes.bson b/dump/production/system.indexes.bson Binary files differindex 8e27220..3d07850 100644 --- a/dump/production/system.indexes.bson +++ b/dump/production/system.indexes.bson diff --git a/regression/LOAEL_mmol_corrected_smiles.json b/regression/LOAEL_mmol_corrected_smiles.json index 8770690..8faca8b 100644 --- a/regression/LOAEL_mmol_corrected_smiles.json +++ b/regression/LOAEL_mmol_corrected_smiles.json @@ -1,5 +1,5 @@ { - "species": "", + "species": "Rodents", "endpoint": "Lowest observed adverse effect level (LOAEL)", "source": "http://www.epa.gov/ncct/dsstox/sdf_cpdbas.html", "unit": "mmol/kg_bw/day" |