diff options
| author | Christoph Helma <helma@in-silico.ch> | 2021-01-23 17:56:29 +0100 |
|---|---|---|
| committer | Christoph Helma <helma@in-silico.ch> | 2021-01-23 17:56:29 +0100 |
| commit | 241f997c3a1a6a38fa47070f5efbd23852cc432b (patch) | |
| tree | 232e82b082da74cace37452cb2e7fb1ce5cec62f /Makefile | |
| parent | 938c40dc83e02ebdd7816fb7a61016fb1db80777 (diff) | |
updated tensorflow pa fingerprint predictions
Diffstat (limited to 'Makefile')
| -rw-r--r-- | Makefile | 6 |
1 files changed, 4 insertions, 2 deletions
@@ -20,7 +20,8 @@ R_CV_DIR = 10-fold-crossvalidations/R TENSORFLOW_CV_DIR = 10-fold-crossvalidations/tensorflow CONFUSION_MATRICES_DIR = 10-fold-crossvalidations/confusion-matrices -CONFUSION_MATRICES = $(CONFUSION_MATRICES_DIR)/lazar-all.csv $(CONFUSION_MATRICES_DIR)/lazar-high-confidence.csv $(CONFUSION_MATRICES_DIR)/lazar-cdk-all.csv $(CONFUSION_MATRICES_DIR)/lazar-cdk-high-confidence.csv $(CONFUSION_MATRICES_DIR)/R-RF.csv $(CONFUSION_MATRICES_DIR)/R-SVM.csv $(CONFUSION_MATRICES_DIR)/R-DL.csv $(CONFUSION_MATRICES_DIR)/tensorflow-rf-cdk.csv $(CONFUSION_MATRICES_DIR)/tensorflow-lr-cdk.csv $(CONFUSION_MATRICES_DIR)/tensorflow-lr2-cdk.csv $(CONFUSION_MATRICES_DIR)/tensorflow-nn-cdk.csv $(CONFUSION_MATRICES_DIR)/tensorflow-rf-mp2d.csv $(CONFUSION_MATRICES_DIR)/tensorflow-lr-mp2d.csv $(CONFUSION_MATRICES_DIR)/tensorflow-lr2-mp2d.csv $(CONFUSION_MATRICES_DIR)/tensorflow-nn-mp2d.csv +#CONFUSION_MATRICES = $(CONFUSION_MATRICES_DIR)/lazar-all.csv $(CONFUSION_MATRICES_DIR)/lazar-high-confidence.csv $(CONFUSION_MATRICES_DIR)/lazar-cdk-all.csv $(CONFUSION_MATRICES_DIR)/lazar-cdk-high-confidence.csv $(CONFUSION_MATRICES_DIR)/R-RF.csv $(CONFUSION_MATRICES_DIR)/R-SVM.csv $(CONFUSION_MATRICES_DIR)/R-DL.csv $(CONFUSION_MATRICES_DIR)/tensorflow-rf-cdk.csv $(CONFUSION_MATRICES_DIR)/tensorflow-lr-cdk.csv $(CONFUSION_MATRICES_DIR)/tensorflow-lr2-cdk.csv $(CONFUSION_MATRICES_DIR)/tensorflow-nn-cdk.csv $(CONFUSION_MATRICES_DIR)/tensorflow-rf-mp2d.csv $(CONFUSION_MATRICES_DIR)/tensorflow-lr-mp2d.csv $(CONFUSION_MATRICES_DIR)/tensorflow-lr2-mp2d.csv $(CONFUSION_MATRICES_DIR)/tensorflow-nn-mp2d.csv +CONFUSION_MATRICES = $(CONFUSION_MATRICES_DIR)/lazar-all.csv $(CONFUSION_MATRICES_DIR)/lazar-high-confidence.csv $(CONFUSION_MATRICES_DIR)/lazar-cdk-all.csv $(CONFUSION_MATRICES_DIR)/lazar-cdk-high-confidence.csv $(CONFUSION_MATRICES_DIR)/tensorflow-rf-cdk.csv $(CONFUSION_MATRICES_DIR)/tensorflow-lr-cdk.csv $(CONFUSION_MATRICES_DIR)/tensorflow-lr2-cdk.csv $(CONFUSION_MATRICES_DIR)/tensorflow-nn-cdk.csv $(CONFUSION_MATRICES_DIR)/tensorflow-rf-mp2d.csv $(CONFUSION_MATRICES_DIR)/tensorflow-lr-mp2d.csv $(CONFUSION_MATRICES_DIR)/tensorflow-lr2-mp2d.csv $(CONFUSION_MATRICES_DIR)/tensorflow-nn-mp2d.csv CV_SUMMARY = 10-fold-crossvalidations/summary.yaml PA_SUMMARY = pyrrolizidine-alkaloids/summary.yaml @@ -33,7 +34,8 @@ PA_LAZAR_DIR = $(PA_DIR)/lazar PA_R_DIR = $(PA_DIR)/R PA_TF_DIR = $(PA_DIR)/tensorflow -PA_PREDICTIONS = $(PA_LAZAR_DIR)/pa-mp2d-predictions.csv $(PA_LAZAR_DIR)/pa-cdk-predictions.csv $(PA_R_DIR)/PA.RF.outcome.csv $(PA_R_DIR)/PA.SVM.outcome.csv $(PA_R_DIR)/PA.DL.outcome.csv $(PA_TF_DIR)/pred.lr.v3-ext-Padel-2D.csv $(PA_TF_DIR)/pred.lr2.v3-ext-Padel-2D.csv $(PA_TF_DIR)/pred.rf.v3-ext-Padel-2D.csv $(PA_TF_DIR)/pred.nn.v3-ext-Padel-2D.csv +#PA_PREDICTIONS = $(PA_LAZAR_DIR)/pa-mp2d-predictions.csv $(PA_LAZAR_DIR)/pa-cdk-predictions.csv $(PA_R_DIR)/PA.RF.outcome.csv $(PA_R_DIR)/PA.SVM.outcome.csv $(PA_R_DIR)/PA.DL.outcome.csv $(PA_TF_DIR)/pred.lr.v5-ext-Padel-2D.csv $(PA_TF_DIR)/pred.lr2.v5-ext-Padel-2D.csv $(PA_TF_DIR)/pred.rf.v5-ext-Padel-2D.csv $(PA_TF_DIR)/pred.nn.v5-ext-Padel-2D.csv +PA_PREDICTIONS = $(PA_LAZAR_DIR)/pa-mp2d-predictions.csv $(PA_LAZAR_DIR)/pa-cdk-predictions.csv $(PA_TF_DIR)/pred.lr.v5-ext-Padel-2D.csv $(PA_TF_DIR)/pred.lr2.v5-ext-Padel-2D.csv $(PA_TF_DIR)/pred.rf.v5-ext-Padel-2D.csv $(PA_TF_DIR)/pred.nn.v5-ext-Padel-2D.csv # manuscript |