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author | Andreas Maunz <andreas@maunz.de> | 2012-05-08 08:18:04 +0200 |
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committer | Andreas Maunz <andreas@maunz.de> | 2012-05-08 08:18:04 +0200 |
commit | b0f3f05d6a8df53956547d04a6a82316ee78b102 (patch) | |
tree | 8c9c9babd0382ac3f69e5f9c951e1751c96112e2 | |
parent | 615b105230453e04bf6ec0354f2c391170e76974 (diff) |
Removed debug
m--------- | bbrc-sample | 0 | ||||
-rw-r--r-- | fminer.rb | 5 |
2 files changed, 1 insertions, 4 deletions
diff --git a/bbrc-sample b/bbrc-sample -Subproject fc4ae7d22a60838a62747069660542c304ce2f1 +Subproject 813595bc811e1fdb71dee0ea9e2f0dc9b6a44cd @@ -359,7 +359,7 @@ post '/fminer/bbrc/sample/?' do @r.assign "dataset.service", CONFIG[:services]["opentox-dataset"] @r.eval "source(\"bbrc-sample/bbrc-sample.R\")" - @r.eval "bootBbrc(dataset.uri, prediction.feature.uri, num.boots, min.frequency.per.sample, min.sampling.support, NULL, bbrc.service, dataset.service, F)" + @r.eval "bootBbrc(dataset.uri, prediction.feature.uri, num.boots, min.frequency.per.sample, min.sampling.support, NULL, bbrc.service, dataset.service, T)" smarts = (@r.pull "ans.patterns").collect! { |id| id.gsub(/\'/,"") } # remove extra quotes around smarts r_p_values = @r.pull "ans.p.values" @@ -369,9 +369,6 @@ post '/fminer/bbrc/sample/?' do lu = LU.new # AM LAST: uses last-utils here params[:nr_hits] == "true" ? hit_count=true: hit_count=false - - LOGGER.debug fminer.smi.to_yaml - LOGGER.debug smarts.to_yaml matches, counts = lu.match_rb(fminer.smi,smarts,hit_count) # AM LAST: creates instantiations matches.each do |smarts, ids| |